pgxRpi is an API wrapper package to access data from Progenetix database. You can
use it to
- Query biosample information from specific group of interests. The group is chosen by filters. More details see this link.
- Query and export copy number variant data with different output formats, which are compatible for different visualization tools.
- Query and visualize CNV frequency data. Details about how to calculate the frequency map see here.
The vignettes are available in github.