API::api.cgi Perl Code Documentation

Articles with Genome Profiles in Progenetix

This page lists all publications for whioch the Progenetix database contains sample-specific genome profiles.

BeaconPlus::ConfigLoader.pm Perl Code Documentation

BeaconPlus::QueryExecution.pm Perl Code Documentation

BeaconPlus::QueryParameters.pm Perl Code Documentation

BeaconPlus::SubsetQueries.pm Perl Code Documentation

BeaconPlusServer::beacondeliver.cgi Perl Code Documentation

BeaconPlusServer::beaconinfo.cgi Perl Code Documentation

BeaconPlusServer::beaconresponse.cgi Perl Code Documentation

Beaconplus Data / Query Model

Data Pages

Directories and File Structure

The Progenetix Jekyll template modifies the standard Jekyll file structure.

Format of the YAML Header

The YAML headers are necessary to process the Markdown (or HTML) files in the page collections. The Progenetix Jekyll template uses standard Jekyll headers, but also adds some additional parameters.

Local Jekyll based website generation

In an ideal scenario, your Github served website could be build locally, with the same output structure and layout.

PGXJS::publication-details.js JavaScript Code Documentation

PGXJS::publication-table.js JavaScript Code Documentation

PGXJS::subset-details.js JavaScript Code Documentation

Progenetix Oncogenomic Knowledge Resource

The Progenetix database provides an overview of copy number abnormalities in human cancer.

Progenetix Publication Collection

The current page lists articles describing whole genome screening (WGS, WES, aCGH, cCGH) experiments in cancer, registered in the Progenetix publication collection.

Progenetix segment file format

ProgenetixInfo::bootstrap_site.pl Perl Code Documentation

ProgenetixInfo::podmd.pl Perl Code Documentation

Publication Details

Publication Pages

User File Uploads