Wherever possible, data annotation in Progenetix uses {S}[B] OntologyClass objects for categorical values, with CURIEs as id values. So far, the Progenetix databases had used pubmed: for PubMed identifiers and ncit: for NCI Metathesaurus (Neoplasm) ids.

@mbaudis 2020-03-30: more ...

• based on NCIt neoplasm core
• first implementation of NCIt concepts mapping in January 2017, for a subset of arrayMap samples
• currently working on the ICDOntoologies mapping project

@mbaudis 2018-05-10: more ...

The group is an active contributor to several public ontologies, both through mapping efforts (ICDOntologies, icdot2uberon) and by requesting terms relevant for genomic and metadata e.g. for EFO.

@mbaudis 2021-01-14: more ...